Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_7187258_7187878_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7187258 - 7187878

Intron Length:

621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

GTTCTCTGCATT

Flanking Amino Acid:

KIESWSQCIQNLDDNLIQEI

Intron Amino Acid Position:

1168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

76.4

0.59

0.9

69.5

35.4

Minor 5ss

38.4

-1.3

3.3

55.8

48.4

Minor BPS

48.7

-0

1.9

70.72

40.3

Associated Gene:

Gene:

EFCAB5

Ensembl Gene ID:

ENSAPLG00000011243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032701

7152792 - 7189414

36623

ENSAPLT00000011715

7152792 - 7189414

36623