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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7201474_7202120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7201474 - 7202120

Intron Length:

647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGATTA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATCCAA

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

EREKRQAALEAYLDVTKQKD

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

73.8

Major BPS

51.5

0.04

1.2

62.5

34.5

Major PPT

85.7

0.8

0.6

85.9

21.2

Minor 5ss

35.6

-1.6

3.1

46.2

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

NSRP1

Ensembl Gene ID:

ENSAPLG00000011228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011678

7191105 - 7205866

14762