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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7210761_7211575_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7210761 - 7211575

Intron Length:

815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCCAGT

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTCCAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTCCAACA

Flanking Amino Acid:

LVVTPGTLKERILKSITPET

Intron Amino Acid Position:

647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.2

65.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

85.1

0.79

0.8

82.1

28.4

Minor 5ss

59.6

0.33

2.2

75.6

40.1

Minor BPS

57.2

0.22

1.8

75.85

35.3

Associated Gene:

Gene:

SLC6A4

Ensembl Gene ID:

ENSAPLG00000010715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011217

7209712 - 7223539

13828