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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7215008_7216137_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7215008 - 7216137

Intron Length:

1130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

ATCTCCTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

ATCTCCTTCACA

Flanking Amino Acid:

FLGSLATLTFGGAYVVKLFE

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

78.3

0.64

0.8

72.3

31.7

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

70.2

0.63

1.7

77.53

39.6

Associated Gene:

Gene:

SLC6A4

Ensembl Gene ID:

ENSAPLG00000010715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011217

7209712 - 7223539

13828