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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7217356_7218075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7217356 - 7218075

Intron Length:

720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTTCT

5'SS Class:

major

3'SS Sequence:

TCTTCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

ATTCCCTGATAT

Flanking Amino Acid:

SYNKFHNNCYQDALVTSTVN

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

71.6

34.4

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

85.1

0.79

0.8

80.1

31.8

Minor 5ss

39.6

-1.2

2.9

56.3

41.9

Minor BPS

52.4

0.15

1.8

74.81

Associated Gene:

Gene:

SLC6A4

Ensembl Gene ID:

ENSAPLG00000010715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011217

7209712 - 7223539

13828