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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7218180_7220052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7218180 - 7220052

Intron Length:

1873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

TACTATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

TTTTTCTTGACT

Flanking Amino Acid:

PDWQKLLATEVWVDAAAQIF

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

77.7

0.69

83.3

27.7

Major PPT

83.4

0.75

0.8

80.7

36.2

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

87.9

1.28

0.8

98.86

22.7

Associated Gene:

Gene:

SLC6A4

Ensembl Gene ID:

ENSAPLG00000010715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011217

7209712 - 7223539

13828