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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7220188_7220572_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7220188 - 7220572

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTCCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

CAAATGCTACCT

Flanking Amino Acid:

IWKGVKTSGKVVWVTATFPY

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

73.5

30.3

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

75.9

0.58

0.8

69.4

31.1

Minor 5ss

26.9

-2.7

32.5

42.3

Minor BPS

36.8

-0.9

2.3

50.77

Associated Gene:

Gene:

SLC6A4

Ensembl Gene ID:

ENSAPLG00000010715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011217

7209712 - 7223539

13828