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Intron Name: Anas_platyrhynchos_platyrhynchos_20_722627_727006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

722627 - 727006

Intron Length:

4380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCACTCTATTT

Flanking Amino Acid:

STYTHCSFFQSPPMQSPYAV

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.77

0.8

77.2

37.1

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

47.9

-0

1.9

68.89

42.6

Associated Gene:

Gene:

HSF5

Ensembl Gene ID:

ENSAPLG00000012874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013398

712399 - 740179

27781