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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7263217_7264096_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7263217 - 7264096

Intron Length:

880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

ATGCCCTCATTC

Flanking Amino Acid:

LVCFLACVATGVELSVNNHA

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

0.5

1.1

71.2

35.2

Major PPT

85.4

0.8

0.7

80.4

24.8

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

48.4

-0.1

1.8

58.63

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019501

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046607

7261881 - 7270890

9010

ENSAPLT00000036044

7261881 - 7268197

6317

ENSAPLT00000024359

7261881 - 7270404

8524