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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7270744_7272665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7270744 - 7272665

Intron Length:

1922

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCAACCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

TCCTTCCCAACC

Flanking Amino Acid:

RALIAWMRRNKFLLSGNLHG

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

35.2

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

68.6

0.42

0.9

59.3

35.8

Minor 5ss

32.6

-2

3.3

40.4

Minor BPS

49.5

-0

1.9

62.62

Associated Gene:

Gene:

CPD

Ensembl Gene ID:

ENSAPLG00000009596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010066

7269980 - 7296129

26150