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Intron Name: Anas_platyrhynchos_platyrhynchos_20_727105_736376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

727105 - 736376

Intron Length:

9272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TGATTTCTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

AATTCTGGAAGT

Flanking Amino Acid:

MQFSQTYYPTAALQCCSPTT

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

78.8

0.65

0.9

74.1

36.4

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

45.9

-0.2

2.3

68.18

42.7

Associated Gene:

Gene:

HSF5

Ensembl Gene ID:

ENSAPLG00000012874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013398

712399 - 740179

27781