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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7284634_7285513_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7284634 - 7285513

Intron Length:

880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGCTG

5'SS Class:

major

3'SS Sequence:

GTTTCGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CAAGGCTGAACG

Flanking Amino Acid:

NPDGYEKSQEGDRGGTVGRN

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

57.1

47.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.76

0.9

80.8

36.8

Minor 5ss

-1.9

3.6

46.8

48.6

Minor BPS

44.6

-0.5

46.12

Associated Gene:

Gene:

CPD

Ensembl Gene ID:

ENSAPLG00000009596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010066

7269980 - 7296129

26150