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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7287978_7288560_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7287978 - 7288560

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

GGTTTGTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TGGCTCTGAGCA

Flanking Amino Acid:

RRSLLQFIKQVHRGIWGFVL

Intron Amino Acid Position:

804

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

70.2

37.7

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

0.4

1.1

65.1

45.5

Minor 5ss

31.7

-2.1

37.9

46.9

Minor BPS

48.2

-0.1

1.7

58.45

40.8

Associated Gene:

Gene:

CPD

Ensembl Gene ID:

ENSAPLG00000009596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010066

7269980 - 7296129

26150