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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7288731_7289272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7288731 - 7289272

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCAAG

5'SS Class:

major

3'SS Sequence:

TCTTCCTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAT

U12 Branch Point Sequence:

AGCCCCTGACAT

Flanking Amino Acid:

GTYKVTASARGYDPVTKTVE

Intron Amino Acid Position:

860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

64.9

42.8

Major BPS

55.3

0.13

1.3

64.4

41.8

Major PPT

71.3

0.48

68.9

Minor 5ss

32.8

-2

2.8

31.4

42.6

Minor BPS

45.5

-0.2

1.8

59.22

43.2

Associated Gene:

Gene:

CPD

Ensembl Gene ID:

ENSAPLG00000009596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010066

7269980 - 7296129

26150