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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7293083_7293268_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7293083 - 7293268

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGGGAT

U12 Branch Point Sequence:

TTTTTCTCCACA

Flanking Amino Acid:

EWHSHLGSMKDFSVTFGHCP

Intron Amino Acid Position:

1179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.1

78.8

38.3

Major BPS

45.5

-0.2

1.6

42.8

49.4

Major PPT

88.6

0.87

0.6

84.4

23.7

Minor 5ss

47.5

-0.2

2.6

67.8

Minor BPS

61.2

0.35

79.1

37.4

Associated Gene:

Gene:

CPD

Ensembl Gene ID:

ENSAPLG00000009596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010066

7269980 - 7296129

26150