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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7293401_7293770_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7293401 - 7293770

Intron Length:

370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTATCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

AATGCTTTATCT

Flanking Amino Acid:

RKSLLSMLVEVHKGVHGFVQ

Intron Amino Acid Position:

1223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

68.4

38.7

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

79.1

0.66

0.9

77.3

35.6

Minor 5ss

32.7

-2

45.6

Minor BPS

60.2

0.4

1.7

75.26

41.6

Associated Gene:

Gene:

CPD

Ensembl Gene ID:

ENSAPLG00000009596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010066

7269980 - 7296129

26150