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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7300520_7302022_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7300520 - 7302022

Intron Length:
1503

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACAAAC

5'SS Class:
major

3'SS Sequence:
TGTTTTATTACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCCTAAT

U12 Branch Point Sequence:
TAATTTTGGACT

Flanking Amino Acid:
TLQRHRDILQDYTHEFHKTK

Intron Amino Acid Position:
113

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.8
0.68
1.1
75.1
35.1

Major BPS
81.9
0.79
0.9
80.1
30

Major PPT
86.6
0.82
0.8
81
35.3

Minor 5ss
39.3
-1.2
2.9
51.9
44.9

Minor BPS
57.7
0.32
1.4
72.77
38

Associated Gene:

Gene:
GOSR1

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7298054 - 7327462
29409