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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7408117_7410759_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7408117 - 7410759

Intron Length:

2643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTAACC

5'SS Class:

major

3'SS Sequence:

CTCTTTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGCTTATAACA

Flanking Amino Acid:

SLAFESRLSKLKRASSDDML

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

65.5

38.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.6

0.8

0.7

80.7

24.6

Minor 5ss

33.7

-1.9

3.1

45.1

42.5

Minor BPS

57.2

0.22

1.6

69.13

37.2

Associated Gene:

Gene:

SPECC1

Ensembl Gene ID:

ENSAPLG00000008288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008643

7387304 - 7477320

90017

ENSAPLT00000020840

7407635 - 7477129

69495