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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7410896_7439549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7410896 - 7439549

Intron Length:

28654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

TTTGCCTCATCT

Flanking Amino Acid:

LAESRLKPSTGAVSAAKRTG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

80.7

33.8

Major BPS

75.5

0.63

40.9

Major PPT

80.8

0.69

79.8

32.6

Minor 5ss

34.6

-1.7

2.9

Minor BPS

61.6

0.44

1.9

84.24

42.6

Associated Gene:

Gene:

SPECC1

Ensembl Gene ID:

ENSAPLG00000008288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020840

7407635 - 7477129

69495

ENSAPLT00000008643

7387304 - 7477320

90017