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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7421014_7439549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7421014 - 7439549

Intron Length:

18536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTATG

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

TTTGCCTCATCT

Flanking Amino Acid:

QPGRAEEHDQGAVSAAKRTG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.3

74.4

41.9

Major BPS

75.5

0.63

40.9

Major PPT

80.8

0.69

79.8

32.6

Minor 5ss

40.8

-1

2.6

51.1

45.4

Minor BPS

61.6

0.44

1.9

84.24

42.6

Associated Gene:

Gene:

SPECC1

Ensembl Gene ID:

ENSAPLG00000008288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038634

7420755 - 7477320

56566

ENSAPLT00000041850

7420974 - 7478918

57945