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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7441109_7442961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7441109 - 7442961

Intron Length:

1853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCAG

5'SS Class:

major

3'SS Sequence:

CCCTCATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TCTTCCCTCATT

Flanking Amino Acid:

LKHVQGLLSKAENECGQLKE

Intron Amino Acid Position:

616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

62.9

43.2

Major BPS

0.3

62.3

30.4

Major PPT

77.8

0.63

0.8

68.6

36.2

Minor 5ss

29.5

-2.4

3.3

37.6

47.1

Minor BPS

57.9

0.33

2.1

80.27

42.1

Associated Gene:

Gene:

SPECC1

Ensembl Gene ID:

ENSAPLG00000008288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008643

7387304 - 7477320

90017

ENSAPLT00000041850

7420974 - 7478918

57945

ENSAPLT00000038634

7420755 - 7477320

56566

ENSAPLT00000020840

7407635 - 7477129

69495