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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7453771_7453976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7453771 - 7453976

Intron Length:

206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTGT

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTCTCTTACA

Flanking Amino Acid:

LIKSFDLGCSGSTGQNISVH

Intron Amino Acid Position:

818

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

63.9

42.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.97

0.6

88.1

21.9

Minor 5ss

36.7

-1.5

3.6

48.2

Minor BPS

61.9

0.37

1.9

80.2

35.2

Associated Gene:

Gene:

SPECC1

Ensembl Gene ID:

ENSAPLG00000008288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020840

7407635 - 7477129

69495

ENSAPLT00000008643

7387304 - 7477320

90017

ENSAPLT00000041850

7420974 - 7478918

57945

ENSAPLT00000038634

7420755 - 7477320

56566