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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7455103_7458949_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7455103 - 7458949

Intron Length:

3847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTGC

5'SS Class:

strong_major

3'SS Sequence:

TTAATTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCCTTTTTAATT

Flanking Amino Acid:

HAELSDLPLSDLLKGRNDEL

Intron Amino Acid Position:

879

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

75.6

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.4

0.57

0.9

69.5

36.6

Minor 5ss

39.9

-1.1

2.9

44.2

Minor BPS

71.7

0.76

1.2

78.3

39.3

Associated Gene:

Gene:

SPECC1

Ensembl Gene ID:

ENSAPLG00000008288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008643

7387304 - 7477320

90017

ENSAPLT00000041850

7420974 - 7478918

57945

ENSAPLT00000038634

7420755 - 7477320

56566

ENSAPLT00000020840

7407635 - 7477129

69495