Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_749234_749552_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

749234 - 749552

Intron Length:

319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTGCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

ACAGATTTAAAG

Flanking Amino Acid:

WEPVDKKETEVTRWVPDHMA

Intron Amino Acid Position:

1054

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

76.4

39.6

Major BPS

81.6

0.78

0.8

24.9

Major PPT

66.3

0.37

58.4

43.1

Minor 5ss

35.2

-1.7

3.5

48.8

47.4

Minor BPS

45.6

-0.4

1.7

44.57

41.3

Associated Gene:

Gene:

MTMR4

Ensembl Gene ID:

ENSAPLG00000012976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013550

748549 - 781584

33036