Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_7528121_7528549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7528121 - 7528549

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCAT

5'SS Class:

major

3'SS Sequence:

ATTCCAAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

TGTCTCTGAATT

Flanking Amino Acid:

PENLSDKSRGRPGKSPERSH

Intron Amino Acid Position:

647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

71.5

39.9

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

67.7

0.4

60.6

38.9

Minor 5ss

32.5

-2

3.4

47.3

48.1

Minor BPS

64.9

0.55

1.4

79.05

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030749

7524034 - 7532487

8454

ENSAPLT00000007855

7524034 - 7538537

14504