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Intron Name: Anas_platyrhynchos_platyrhynchos_20_753029_753506_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
753029 - 753506

Intron Length:
478

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACACATT

5'SS Class:
major

3'SS Sequence:
CTTGTGTTCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACAGCAA

U12 Branch Point Sequence:
GTTGCCTGCAGT

Flanking Amino Acid:
LLDPYYRTMEGFQVLVESDW

Intron Amino Acid Position:
436

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74
0.57
1.1
75.3
40.7

Major BPS
43.2
-0.4
1.3
45.7
37.1

Major PPT
77.9
0.63
0.9
72.2
37.8

Minor 5ss
43.6
-0.7
3.3
66.1
45

Minor BPS
46.4
-0.2
2.3
69.32
47.1

Associated Gene:

Gene:
MTMR4

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

748549 - 781584
33036