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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7531840_7532410_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7531840 - 7532410

Intron Length:
571

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACAAGCT

5'SS Class:
major

3'SS Sequence:
GTGGATGTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTCAA

U12 Branch Point Sequence:
GCTATTTCAAAT

Flanking Amino Acid:
RPYNPASLSPGHPTHLAASA

Intron Amino Acid Position:
217

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.4
0.53
1.1
66
38

Major BPS
82
0.79
0.8
83.7
25.7

Major PPT
65.2
0.34
1.1
54.1
49.5

Minor 5ss
31.4
-2.1
3.7
48.4
47.3

Minor BPS
48
-0
1.6
62.5
41.5

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7524034 - 7538537
14504