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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7568579_7569864_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7568579 - 7569864

Intron Length:

1286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAGGCA

5'SS Class:

major

3'SS Sequence:

GTCTCCATGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TTTTGTTCAATT

Flanking Amino Acid:

EGLRSADIKKDPAFGGKHEG

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

65.2

34.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

55.3

0.12

1.2

56.3

37.9

Minor 5ss

23.4

-3.1

3.3

29.7

43.3

Minor BPS

61.4

0.43

1.9

83.73

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025675

7568246 - 7573290

5045