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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7573361_7573692_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7573361 - 7573692

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTCCA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TTATCAGTGATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

62.4

37.5

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

90.2

0.9

0.6

89.9

18.2

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

48.4

-0.1

2.2

67.44

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034781

7571097 - 7573813

2717