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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7594318_7629126_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7594318 - 7629126

Intron Length:

34809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCATTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CACTTCTCATTT

Flanking Amino Acid:

PASNVTVVDHRDLPDNPSVE

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

82.3

0.73

0.7

80.7

30.9

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

47.3

-0.1

1.8

60.34

43.9

Associated Gene:

Gene:

PIGL

Ensembl Gene ID:

ENSAPLG00000007459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019790

7588498 - 7649355

60858

ENSAPLT00000007740

7588016 - 7649355

61340