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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7643539_7648304_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7643539 - 7648304

Intron Length:

4766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTATTTTGAAAT

Flanking Amino Acid:

YLHSEQKLPEGCRVLVLESV

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

36.6

Major BPS

84.7

0.86

74.3

40.7

Major PPT

80.2

0.68

0.7

73.9

31.2

Minor 5ss

40.6

-1

2.8

52.4

44.8

Minor BPS

61.9

0.45

1.5

78.71

Associated Gene:

Gene:

PIGL

Ensembl Gene ID:

ENSAPLG00000007459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019790

7588498 - 7649355

60858

ENSAPLT00000007740

7588016 - 7649355

61340