Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_7652938_7653791_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7652938 - 7653791

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

CTTCTCTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

GCTTACATAACC

Flanking Amino Acid:

EEAARLLLDAFEYRGLVKHT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

63.1

36.9

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

85.1

0.79

0.7

77.1

31.6

Minor 5ss

29.2

-2.4

3.2

41.8

Minor BPS

0.23

1.8

69.46

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007730

7650812 - 7654042

3231