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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7675991_7676708_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7675991 - 7676708

Intron Length:

718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGCAA

U12 Branch Point Sequence:

TTGGCAATGAGT

Flanking Amino Acid:

NVACSDCYYRGQTALHIAIE

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

50.7

0.02

1.5

63.4

44.3

Major PPT

81.6

0.71

0.8

77.3

31.5

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

43.4

-0.4

2.2

65.06

45.5

Associated Gene:

Gene:

TRPV2

Ensembl Gene ID:

ENSAPLG00000007192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025286

7674469 - 7682796

8328

ENSAPLT00000007485

7674469 - 7682796

8328

ENSAPLT00000041435

7675417 - 7681519

6103

ENSAPLT00000040745

7672928 - 7680398

7471

ENSAPLT00000028306

7672928 - 7680398

7471