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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7695410_7696051_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7695410 - 7696051

Intron Length:

642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

CTTGTCTGACCA

Flanking Amino Acid:

MKSTWQKCSKVRFAVVQYGA

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

75.4

28.8

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

87.9

0.85

0.7

80.6

31.4

Minor 5ss

32.6

-2

3.1

39.4

46.5

Minor BPS

48.9

-0

1.9

63.1

43.6

Associated Gene:

Gene:

ITGAE

Ensembl Gene ID:

ENSAPLG00000006516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041563

7693506 - 7718235

24730

ENSAPLT00000006824

7688228 - 7718235

30008