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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7700144_7700730_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7700144 - 7700730

Intron Length:

587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTCTGATTAATT

Flanking Amino Acid:

MAGIERYAIGVGDAFKKPKA

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

43.7

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

82.7

0.74

0.8

77.3

30.7

Minor 5ss

39.2

-1.2

2.8

45.3

Minor BPS

0.39

80.74

41.5

Associated Gene:

Gene:

ITGAE

Ensembl Gene ID:

ENSAPLG00000006516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041563

7693506 - 7718235

24730

ENSAPLT00000006824

7688228 - 7718235

30008