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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7701940_7702795_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7701940 - 7702795

Intron Length:

856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

GTGAATGCACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

CTTGTGTGAATG

Flanking Amino Acid:

EAKKAKYSYLGYSVAVVRTG

Intron Amino Acid Position:

679

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

81.4

32.7

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

54.1

0.09

1.1

44.3

46.3

Minor 5ss

39.7

-1.2

2.9

51.2

45.7

Minor BPS

43.7

-0.6

2.2

50.82

44.3

Associated Gene:

Gene:

ITGAE

Ensembl Gene ID:

ENSAPLG00000006516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006824

7688228 - 7718235

30008

ENSAPLT00000041563

7693506 - 7718235

24730