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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7706947_7707506_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7706947 - 7707506

Intron Length:

560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGAT

5'SS Class:

major

3'SS Sequence:

TCCTTTCTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

GATATTTTATCA

Flanking Amino Acid:

TCSELQLFTLPCDFDCFSNV

Intron Amino Acid Position:

983

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

74.1

36.5

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

84.3

0.77

0.7

80.5

24.8

Minor 5ss

33.1

-1.9

3.5

45.5

Minor BPS

52.3

0.07

1.6

61.57

38.4

Associated Gene:

Gene:

ITGAE

Ensembl Gene ID:

ENSAPLG00000006516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006824

7688228 - 7718235

30008

ENSAPLT00000041563

7693506 - 7718235

24730