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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7707636_7708933_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7707636 - 7708933

Intron Length:

1298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TAAATTTTAACT

Flanking Amino Acid:

KYQPSEMHFQLPYKKDCNKT

Intron Amino Acid Position:

1026

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

89.7

0.98

0.7

89.9

Major PPT

84.3

0.77

0.9

81.2

36.5

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

69.3

0.68

1.2

78.49

37.4

Associated Gene:

Gene:

ITGAE

Ensembl Gene ID:

ENSAPLG00000006516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041563

7693506 - 7718235

24730

ENSAPLT00000006824

7688228 - 7718235

30008