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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7709002_7709414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7709002 - 7709414

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTCAA

5'SS Class:

major

3'SS Sequence:

TCTCTGCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

TTTACACGAAGC

Flanking Amino Acid:

TAHLTLTSQIQNELVVGYTK

Intron Amino Acid Position:

1048

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

64.3

37.3

Major BPS

72.8

0.57

30.3

Major PPT

77.6

0.62

0.8

69.5

36.8

Minor 5ss

30.3

-2.3

2.9

37.7

40.9

Minor BPS

43.4

-0.5

2.2

62.52

Associated Gene:

Gene:

ITGAE

Ensembl Gene ID:

ENSAPLG00000006516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041563

7693506 - 7718235

24730

ENSAPLT00000006824

7688228 - 7718235

30008