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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7710320_7711228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7710320 - 7711228

Intron Length:

909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

NKSAITVNITNINENTTILT

Intron Amino Acid Position:

1153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

89.7

22.3

Major BPS

70.8

0.52

70.6

31.6

Major PPT

84.1

0.77

0.9

86.1

25.6

Minor 5ss

37.9

-1.4

51.7

39.1

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

ITGAE

Ensembl Gene ID:

ENSAPLG00000006516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041563

7693506 - 7718235

24730

ENSAPLT00000006824

7688228 - 7718235

30008