Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_7716379_7716845_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7716379 - 7716845

Intron Length:

467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATGCG

5'SS Class:

major

3'SS Sequence:

TCTTACTTCATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

TACTTCTTACTT

Flanking Amino Acid:

AELSLINADQFLKRRIDLLI

Intron Amino Acid Position:

1297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

64.8

39.5

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

77.5

0.62

0.8

72.5

31.9

Minor 5ss

38.4

-1.3

3.1

49.9

46.5

Minor BPS

63.5

0.5

1.6

76.1

41.2

Associated Gene:

Gene:

ITGAE

Ensembl Gene ID:

ENSAPLG00000006516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041563

7693506 - 7718235

24730

ENSAPLT00000006824

7688228 - 7718235

30008