Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_7716942_7717582_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7716942 - 7717582

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCTGAG

5'SS Class:

major

3'SS Sequence:

GATTCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TTGGCCTTGATT

Flanking Amino Acid:

GLREEEHNTEITLIFLKEEV

Intron Amino Acid Position:

1329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.2

64.9

41.2

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

77.1

0.61

73.3

41.6

Minor 5ss

43.7

-0.7

57.3

47.4

Minor BPS

71.7

0.77

1.4

82.57

39.6

Associated Gene:

Gene:

ITGAE

Ensembl Gene ID:

ENSAPLG00000006516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041563

7693506 - 7718235

24730

ENSAPLT00000006824

7688228 - 7718235

30008