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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7731118_7732442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7731118 - 7732442

Intron Length:

1325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCACTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TCCTCTTCCACT

Flanking Amino Acid:

PNQKQATCPESASIPDALCY

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.7

40.1

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

82.4

0.73

0.8

76.5

31.6

Minor 5ss

31.4

-2.1

3.1

40.2

45.5

Minor BPS

51.4

0.13

71.32

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046197

7721634 - 7738036

16403

ENSAPLT00000006338

7727409 - 7738036

10628