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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7732519_7732874_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7732519 - 7732874

Intron Length:

356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGACCAT

U12 Branch Point Sequence:

TCTGTGTGACCA

Flanking Amino Acid:

PAGQAVVAGNGVKTGRCLKE

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

69.9

42.1

Major BPS

50.4

0.01

1.4

60.8

45.4

Major PPT

72.3

0.5

65.2

41.2

Minor 5ss

32.1

-2

3.1

40.5

45.5

Minor BPS

41.3

-0.6

2.3

54.77

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046197

7721634 - 7738036

16403

ENSAPLT00000006338

7727409 - 7738036

10628