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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7734400_7735168_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7734400 - 7735168

Intron Length:

769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCGTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

TAAGCTTAAAAA

Flanking Amino Acid:

GSDFHEMALEGGVIGIQIEW

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.9

41.1

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

69.9

0.45

1.1

74.9

33.8

Minor 5ss

32.6

-2

3.7

46.1

49.1

Minor BPS

48.3

-0.1

1.8

58.36

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006338

7727409 - 7738036

10628

ENSAPLT00000046197

7721634 - 7738036

16403