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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7768857_7769222_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7768857 - 7769222

Intron Length:

366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACACTT

5'SS Class:

major

3'SS Sequence:

TTGTTTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAC

U12 Branch Point Sequence:

TTGTTTGTTACA

Flanking Amino Acid:

LKHLTDDEFKEPETGKTCLL

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

75.5

40.6

Major BPS

67.1

0.43

1.2

69.3

37.7

Major PPT

0.79

0.9

79.9

37.7

Minor 5ss

43.4

-0.7

3.2

65.6

45.4

Minor BPS

47.6

-0.2

2.2

65.78

41.1

Associated Gene:

Gene:

TRPV1

Ensembl Gene ID:

ENSAPLG00000004676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026851

7766735 - 7776053

9319

ENSAPLT00000004911

7767841 - 7777168

9328