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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7769376_7769758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7769376 - 7769758

Intron Length:

383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

AGTGTCTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

AAATGCTTAAGA

Flanking Amino Acid:

NAEYTDNYYKGQTALHIAIE

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

40.1

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

69.9

0.45

0.9

63.2

38.9

Minor 5ss

29.3

-2.4

3.3

Minor BPS

52.9

0.09

2.1

63.9

42.1

Associated Gene:

Gene:

TRPV1

Ensembl Gene ID:

ENSAPLG00000004676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026851

7766735 - 7776053

9319

ENSAPLT00000004911

7767841 - 7777168

9328