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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7769900_7770399_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7769900 - 7770399

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTATCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CATTCATTCACA

Flanking Amino Acid:

KIKGKPGFYFGELPLSLAAC

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

79.7

0.67

0.8

74.8

35.1

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

55.7

0.17

2.1

69.72

42.3

Associated Gene:

Gene:

TRPV1

Ensembl Gene ID:

ENSAPLG00000004676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026851

7766735 - 7776053

9319

ENSAPLT00000004911

7767841 - 7777168

9328