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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7771927_7772217_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7771927 - 7772217

Intron Length:

291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTACACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

TTTTGCTGAACA

Flanking Amino Acid:

YYRPVDKKEKPPFTFGHSTG

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.1

28.4

Major BPS

0.42

1.1

57.3

41.7

Major PPT

0.61

0.9

72.7

36.6

Minor 5ss

46.6

-0.3

2.5

60.6

44.5

Minor BPS

69.7

0.62

1.9

84.45

35.5

Associated Gene:

Gene:

TRPV1

Ensembl Gene ID:

ENSAPLG00000004676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026851

7766735 - 7776053

9319

ENSAPLT00000004911

7767841 - 7777168

9328