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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7772314_7772940_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7772314 - 7772940

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CCCTGCTCACTA

Flanking Amino Acid:

LGGLYFFFRGIQYFVQRRPS

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

77.7

33.3

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

89.5

0.89

0.6

81.6

30.4

Minor 5ss

39.2

-1.2

3.1

48.1

47.5

Minor BPS

41.4

-0.6

2.1

46.19

44.3

Associated Gene:

Gene:

TRPV1

Ensembl Gene ID:

ENSAPLG00000004676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004911

7767841 - 7777168

9328

ENSAPLT00000026851

7766735 - 7776053

9319